Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCCTTCACCTTGCCAGGTG
((((((((..............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018921
GeneSymbolPCDHGA9
Binding site4240,4261
Score0.846
Seed1
Au0.382
Energy-14.9
Binding len10
Me-15.523
Phylopstem1.5032080875
Phylopflank0.53085207125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure