Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTCCCAGGCTGCAGC
((((((((..((..((.((((&))))))..)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018921
GeneSymbolPCDHGA9
Binding site37,57
Score0.897
Seed1
Au0.5
Energy-19.6
Binding len20
Me-8.382
Phylopstem-0.2136284125
Phylopflank0.3634250344078947
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure