Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTCAGATAACCGCGCCGCTGCAC
.(((((((((((((((.((((&))))...)))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365479
GeneSymbolUSP40
Binding site3818,3843
Score0.923
Seed1
Au0.368
Energy-22.9
Binding len25
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure