Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGACCACGAGCAGCTGCGC
.((((((((((((((.(((((&))))))))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018922
GeneSymbolPCDHGB1
Binding site1704,1728
Score0.923
Seed1
Au0.309
Energy-27.6
Binding len24
Me-4.026
Phylopstem0.6348287222222223
Phylopflank1.7039463642499997
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure