Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAGCCGCGGGAGCTGTT
..((((((((((((.(.((((&))))).))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018922
GeneSymbolPCDHGB1
Binding site1633,1655
Score0.846
Seed1
Au0.353
Energy-21.6
Binding len22
Me-5.692
Phylopstem1.4882248093333332
Phylopflank0.9539365195000002
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure