Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGATCATGAGCAGCTGCGC
.((((((((((((((.(((((&))))))))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018923
GeneSymbolPCDHGB2
Binding site1696,1720
Score0.846
Seed1
Au0.324
Energy-25.0
Binding len24
Me-4.026
Phylopstem0.32880516666666665
Phylopflank1.4482908299999997
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure