Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCTACGGCCACGCTGCAC
.((((((.(.(((((((.((.&))..))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018923
GeneSymbolPCDHGB2
Binding site2105,2125
Score0.897
Seed1
Au0.368
Energy-21.4
Binding len20
Me-7.349
Phylopstem-0.15624461428571426
Phylopflank0.2952110862500002
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure