Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACACTGACCAACGCAGCTGGCAAG
((((((((((((((((..(((&)))..)).))))...))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018923
GeneSymbolPCDHGB2
Binding site2842,2869
Score0.846
Seed1
Au0.353
Energy-20.7
Binding len27
Me-3.938
Phylopstem1.4941186952380956
Phylopflank1.714381015
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure