Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTGGGGAGGCAGGGAGCTAGGGCAGGGA
...((((((.(((((((((((&))).))))))))...........)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_018924
GeneSymbolPCDHGB3
Binding site4110,4140
Score1.0
Seed0
Au0.412
Energy-27.5
Binding len30
Me-7.757
Phylopstem0.4655163083333333
Phylopflank0.42035690125
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure