Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGACCACGAGCAGCTGCGT
.((((((((((((((.(((((&))))))))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018924
GeneSymbolPCDHGB3
Binding site1707,1731
Score0.846
Seed1
Au0.324
Energy-27.5
Binding len24
Me-4.026
Phylopstem1.472389555555556
Phylopflank0.15010656249999993
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure