Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCCGCCTGGAGCTGCT
..((((((.((((.(((.(((&))).))).))).).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018925
GeneSymbolPCDHGB5
Binding site2327,2348
Score0.923
Seed1
Au0.353
Energy-22.4
Binding len21
Me-6.87
Phylopstem1.5262971333333335
Phylopflank0.16748499
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure