Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCCTTCACCTTGCCAGGTG
((((((((..............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018926
GeneSymbolPCDHGB6
Binding site4241,4262
Score0.846
Seed1
Au0.382
Energy-14.9
Binding len10
Me-15.523
Phylopstem0.41747415000000015
Phylopflank0.8085307799999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure