Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGCATTTTGCCAGA
..((((((...((((((((((.&)))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001365480
GeneSymbolCCDC88A
Binding site7318,7336
Score0.923
Seed1
Au0.75
Energy-20.8
Binding len18
Me-10.081
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure