Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCGGTGATTTTGTGCCAGGG
.(((((((((.(((........&.))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001365480
GeneSymbolCCDC88A
Binding site44,64
Score1.0
Seed1
Au0.368
Energy-17.0
Binding len15
Me-7.587
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure