Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTGGATACGGACAGTCTGTCAGCTCGCAGGCTGCAGG
(((((((((((((((..(((.&.)))..)))).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018928
GeneSymbolPCDHGC4
Binding site299,340
Score1.0
Seed1
Au0.426
Energy-24.4
Binding len24
Me-4.171
Phylopstem1.6982682058823526
Phylopflank2.4846665787499997
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure