Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCCCACCCCCGGGAGGGGAAGGGGGCTGGA
..(((((((((((((((((...&.))))........))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001365480
GeneSymbolCCDC88A
Binding site131,163
Score0.846
Seed1
Au0.279
Energy-23.2
Binding len27
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure