Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCCGGCGGCTGCAAT
((((((((((((((.......&))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018929
GeneSymbolPCDHGC5
Binding site340,356
Score0.981
Seed1
Au0.485
Energy-22.1
Binding len16
Me-4.906
Phylopstem1.433960326666667
Phylopflank2.1745005187499995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure