Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCACTGTGGCTGCC
..((((((((((.(((((((.&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018929
GeneSymbolPCDHGC5
Binding site1576,1594
Score1.0
Seed1
Au0.382
Energy-23.7
Binding len18
Me-6.246
Phylopstem2.194491892
Phylopflank2.1269775605
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure