Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGCTGTGCTGCAC
.((((((.(((((((...(((&))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018929
GeneSymbolPCDHGC5
Binding site1840,1858
Score0.923
Seed1
Au0.397
Energy-21.0
Binding len18
Me-6.34
Phylopstem1.4066639999999997
Phylopflank1.7290029200000003
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure