Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAAACTGTGGTTGCAC
.(((((((((((((...((((&))))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018933
GeneSymbolPCDHB13
Binding site1287,1307
Score0.981
Seed1
Au0.529
Energy-23.3
Binding len20
Me-4.762
Phylopstem-3.185048992307692
Phylopflank-1.58835229625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure