Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCAAGTCTTGCTTCTCTTTGTTTTTCTGGGAGGGTCTCTGGCTGGGTCC
.(((((.((((((((((((..&.)))))))).))...)).))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_018937
GeneSymbolPCDHB3
Binding site211,261
Score0.923
Seed0
Au0.471
Energy-26.4
Binding len24
Me-5.337
Phylopstem1.2209108812500005
Phylopflank-0.16309615874999994
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure