Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGTTTAGCCAGGA
.((((((.((.(((((((....&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018941
GeneSymbolCLN8
Binding site3937,3953
Score0.923
Seed1
Au0.441
Energy-18.3
Binding len16
Me-8.932
Phylopstem-0.3066739714285714
Phylopflank-0.41390314545000007
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure