Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGGAGGAGGAGGCGGCGGCTGCGGA
((((((((((.(((.......&.))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018944
GeneSymbolMIS18A
Binding site235,265
Score0.923
Seed1
Au0.265
Energy-20.4
Binding len16
Me-7.731
Phylopstem0.02861120000000001
Phylopflank-0.29861717750000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure