Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGGGCTCCCCAACCAAGCAGCTGCT
..(((((((((((((...(((&.)))...)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018946
GeneSymbolNANS
Binding site890,919
Score0.846
Seed1
Au0.368
Energy-23.2
Binding len23
Me-5.19
Phylopstem3.6245703133333333
Phylopflank4.426073562500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure