Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTAATTGCAGCTATTTGAGAGGCTGAGGCAGG
(((((((((((((((..((((&)))).)))))))))))...............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018947
GeneSymbolCYCS
Binding site4666,4702
Score0.923
Seed1
Au0.456
Energy-19.2
Binding len36
Me-4.171
Phylopstem0.33626901000000003
Phylopflank0.42100955125
Longest consecutive pairings11
Position of longest consecutive pairings20
Pairings in 3prime end6
Position3UTR
2D Structure