Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACGGCAACAGCTGCGC
.((((((((..(((((.((((&)))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018949
GeneSymbolUTS2R
Binding site1460,1480
Score0.846
Seed1
Au0.382
Energy-24.6
Binding len20
Me-7.861
Phylopstem6.496025625000001
Phylopflank3.2257486312499997
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure