Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGCTGGAAAGGGAGGGAGGACGCGAGGGGAAAGGCCTGTGGGGA
...(((((((((((((((..(&.)..))))).))).))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_018952
GeneSymbolHOXB6
Binding site1015,1061
Score0.846
Seed0
Au0.309
Energy-24.5
Binding len22
Me-6.515
Phylopstem2.4380280588235292
Phylopflank2.1960058912500005
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure