Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCGGCGGCGCAT
.(((.(((((.(((((.....&))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018952
GeneSymbolHOXB6
Binding site854,869
Score0.846
Seed0
Au0.338
Energy-19.1
Binding len15
Me-10.737
Phylopstem4.6216838000000005
Phylopflank4.4154303325
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure