Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGCAAGGTGCTGCAGCA
.....(((((((((((..(((&)))..)))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018956
GeneSymbolSPACA9
Binding site627,648
Score0.846
Seed0
Au0.441
Energy-18.7
Binding len21
Me-13.666
Phylopstem1.0685426666666666
Phylopflank2.0143213236250004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure