Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACCTCAGCTGTGAC
(((((((((.(((.((.....&)).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018956
GeneSymbolSPACA9
Binding site521,538
Score0.885
Seed1
Au0.412
Energy-17.9
Binding len17
Me-6.037
Phylopstem3.6613016666666667
Phylopflank2.9429456775
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure