Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATGGGCCGCAGCA
.....(((((((((...(((.&)))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018958
GeneSymbolNPAP1
Binding site2421,2438
Score0.846
Seed0
Au0.412
Energy-21.0
Binding len17
Me-14.634
Phylopstem0.23789831111111115
Phylopflank-0.25055273000000006
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure