Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCACCAGCCCAGCTGCGGG
(((((((((.(((((...((.&))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018961
GeneSymbolUBASH3A
Binding site2224,2243
Score0.923
Seed1
Au0.324
Energy-22.6
Binding len19
Me-5.413
Phylopstem-0.9616221111111112
Phylopflank-0.6060132324999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure