Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGGATTACTCGAAGATGTGCAGCTACGGCTGCC
..(((((((.(((((((....&.))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018963
GeneSymbolBRWD1
Binding site5912,5949
Score0.846
Seed1
Au0.529
Energy-21.1
Binding len17
Me-6.2
Phylopstem1.6752537142857142
Phylopflank1.48180069
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure