Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGAAAGTTCCCCGCAGATGTGCTACTGTTGCTGCAAA
(((((((.(((((.(((((((&))))....................))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018963
GeneSymbolBRWD1
Binding site6818,6860
Score0.846
Seed1
Au0.647
Energy-20.0
Binding len42
Me-7.108
Phylopstem4.682153777777778
Phylopflank4.0971605725
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure