Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACGCACAACTTGTGGCTGCT
..((((((((((((((..(((&)).)..)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018965
GeneSymbolTREM2
Binding site227,249
Score1.0
Seed1
Au0.412
Energy-20.0
Binding len22
Me-4.957
Phylopstem-0.25751148
Phylopflank0.36981478374999993
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure