Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGAGCCTTTCAAAGTGCGGCTGCAC
.((((((((((.(((.(((((&.))))).)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018967
GeneSymbolSNTG1
Binding site988,1017
Score0.846
Seed1
Au0.5
Energy-25.3
Binding len23
Me-7.373
Phylopstem5.4988630999999994
Phylopflank5.6667599125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure