Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTACAGCCTATGGAGGTCTGCAGAGCCTGCAGA
((((((((((((((((((((.&))))))))))...........))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018974
GeneSymbolUNC93A
Binding site228,263
Score0.846
Seed1
Au0.412
Energy-22.1
Binding len35
Me-3.938
Phylopstem3.6384704176470595
Phylopflank2.78202513
Longest consecutive pairings10
Position of longest consecutive pairings25
Pairings in 3prime end7
PositionCDS
2D Structure