Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TAGGTTGTATATAATGTCAGGTT
((((((((((((((.((.....&)).)))))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018976
GeneSymbolSLC38A2
Binding site4278,4301
Score0.846
Seed1
Au0.676
Energy-16.5
Binding len23
Me-4.673
Phylopstem4.062462421052632
Phylopflank3.7167397687499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure