Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTAAGACCTGCCAGGG
.(((((((.......(((((..&))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018976
GeneSymbolSLC38A2
Binding site3834,3852
Score0.923
Seed1
Au0.588
Energy-15.8
Binding len18
Me-15.145
Phylopstem2.9090960714285714
Phylopflank3.509872095
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure