Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGTTTTTACAGCCTGCAGAACTGCAAG
((((((((((((((((((((.&.)))))))))).))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018981
GeneSymbolDNAJC10
Binding site6155,6186
Score0.846
Seed1
Au0.618
Energy-24.3
Binding len25
Me-3.938
Phylopstem0.024180782608695658
Phylopflank0.23908283750000006
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure