Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGATACTGGACAGCTGAACTGAATGGCTGCAAA
((((((((((((((((..(((&.)))..))))))).......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018982
GeneSymbolYIPF1
Binding site1768,1804
Score0.923
Seed1
Au0.589
Energy-21.3
Binding len30
Me-3.938
Phylopstem-0.4116125739130434
Phylopflank0.4218953358333334
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure