Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGTGTAGTCAGGG
.((((((.((((..(((((...&)))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018984
GeneSymbolSSH1
Binding site9427,9445
Score0.923
Seed1
Au0.515
Energy-20.4
Binding len18
Me-8.253
Phylopstem-0.7568423333333333
Phylopflank-0.453091233875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure