Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCATGAGCCCCAGGGAACCCCGAGGGACCCAGCTGCAAC
(((((((((.((((.(..((.&.))..).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018984
GeneSymbolSSH1
Binding site3127,3170
Score1.0
Seed1
Au0.338
Energy-24.7
Binding len21
Me-5.916
Phylopstem0.30009199999999997
Phylopflank0.02131963749999998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure