Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGGGGCTGGAGCTGCC
..((((((.(((((.((.(((&))).)).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018984
GeneSymbolSSH1
Binding site2266,2286
Score0.846
Seed1
Au0.338
Energy-23.5
Binding len20
Me-6.749
Phylopstem0.603797
Phylopflank0.26698838625
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure