Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGCAAGGGCTGGGGGTCTC
(((((((.(((((((..(((.&)))..)))))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_018986
GeneSymbolSH3TC1
Binding site4181,4201
Score0.923
Seed1
Au0.368
Energy-25.9
Binding len20
Me-6.484
Phylopstem-0.5217082857142857
Phylopflank-0.32663719499999994
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure