Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGCAGCCGCAGG
......((((((((((..(((&)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018986
GeneSymbolSH3TC1
Binding site1407,1423
Score0.846
Seed0
Au0.456
Energy-22.6
Binding len16
Me-15.567
Phylopstem-0.04903615500000001
Phylopflank0.44855889462500015
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure