Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCTGAGAGAGCGCCGGG
..(((((.((((((.((((...&)))).))))).).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001365536
GeneSymbolSCN9A
Binding site149,168
Score0.923
Seed0
Au0.338
Energy-22.5
Binding len19
Me-8.006
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings9
Pairings in 3prime end4
Position5UTR
2D Structure