Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCTTCACTGGCAGGAAGCGGCCGCAGCCGCGT
.(((.(((((((((((.....&.))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018992
GeneSymbolKCTD5
Binding site1092,1130
Score1.0
Seed0
Au0.309
Energy-24.4
Binding len17
Me-7.912
Phylopstem0.4555429909090909
Phylopflank0.53562321
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end3
Position3UTR
2D Structure