Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAAGTTACCCAACAAAGGATTTTATTCCACATTTGTGTGCCGGGTC
((((((((((((((((.((...&.)).))))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018994
GeneSymbolFBXO42
Binding site2973,3020
Score0.923
Seed1
Au0.603
Energy-24.0
Binding len22
Me-3.938
Phylopstem0.0880531411764706
Phylopflank0.008850481250000042
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure