Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGCCGCAGTCCTTGCGAA
(((((((((((((..((((((&))))))))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018996
GeneSymbolTNRC6C
Binding site5802,5825
Score0.923
Seed1
Au0.397
Energy-23.7
Binding len23
Me-5.53
Phylopstem1.82618841875
Phylopflank2.02270075875
Longest consecutive pairings14
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure